Cocultures: Gene Expression
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The CRC-TME interaction atlas: Home
Networks
Receptor-ligand interactions in OTs
Transcriptional regulatory networks in colon/CRC epithelium
Comparison of OTs to cultured cells
Gene Expression
Differential Expression
PDOs co-cultured with TME cells
Gene Expression
Differential Expression
Enriched Pathways
Cells to use:
All
EP
CAF
TC
MP
Patients:
TF
DZ
RT
FV
GQ
MS
NW
NS
VB
VQ.0O
VQ.0T
Type of plot:
Gene expression
Metadata
Metadata to plot:
nCount_RNA
nFeature_RNA
celltype
patient
culture
dataset
percent.mito
patient_celltype
dataset_celltype
culture_celltype
patient_culture_celltype
Update plot
Gene(s) to plot:
Update plot
Identity annotations:
celltype
patient
culture
dataset
patient_celltype
dataset_celltype
culture_celltype
patient_culture_celltype
Plot higher values on top
Violin plot
Label
Show axis
Show legend
Point size
Label size
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