Legend
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CRC-TME Home
Transcriptional regulatory networks in colon/CRC epithelium
Original tumor vs monocultures gene expression
Original tumor vs monocultures differential expression
Original tumor vs monocultures enriched pathways
Co-cultures gene expression
Co-cultures differential expression
Co-cultures enriched pathways
Tools
Dataset:
All interactions
Cancer interactions
Color-coded:
Cell types
CMS
None
Layout:
Default view
Force-directed iterative
Force-directed random
Filter threshold
2.5%
5%
7.5%
10%
15%
20%
25%
30%
40%
50%
60%
70%
80%
90%
Donating cells:
All cells
Epithelial (cancer)
Epithelial (healthy)
Endothelial cells
Fibroblasts/Pericytes
T-like cells
Plasma/B-cells
Antigen presenting cells
Myocytes/Myoblasts
MAST-like cells
Schwann cells
Liver cells
Not Epithelial (cancer)
Not Epithelial (cancer)
Not Endothelial cells
Not Fibroblasts/Pericytes
Not T-like cells
Not Plasma/B-cells
Not Antigen presenting cells
Not Myocytes/Myoblasts
Not MAST-like cells
Not Schwann cells
Not Liver cells
Receiving cells:
All cells
Epithelial (cancer)
Epithelial (healthy)
Endothelial cells
Fibroblasts/Pericytes
T-like cells
Plasma/B-cells
Antigen presenting cells
Myocytes/Myoblasts
MAST-like cells
Schwann cells
Liver cells
Not Epithelial (cancer)
Not Epithelial (healthy)
Not Endothelial cells
Not Fibroblasts/Pericytes
Not T-like cells
Not Plasma/B-cells
Not Antigen presenting cells
Not Myocytes/Myoblasts
Not MAST-like cells
Not Schwann cells
Not Liver cells
Patient:
All patients
Search+Select:
Shortcuts:
Enter:
Crop to selection
and apply iterative
force-directed layout
F:
Force-directed layout from random initialization (useful to regroup small disconnected networks)
R:
Reset all
N:
Extend selection to Neighbors
Right click:
Get detailed info
Z:
Zoom to fit the selection (unzoom if no selection)
Click:
Select
Shift+Click:
Add to or remove from selection
Ctrl+Click:
Select area
Click+Drag on node:
Move selection
Click+Drag on background:
Pan
Touch pad or wheel:
Zoom
Delete:
Delete the selection
C:
Crop to the selection
